DNA Unit of Virtual
Materials Design Platform



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DNA Unit of Virtual Materials Design platform (DNA VirtMat Unit) within Center SynGen focuses on modeling the structure and properties of DNA and chromatin using scale-bridging computational approaches, synthetic genomics by in-silico genome analysis, engineering and structuring using multiscale models and ML/AI methods, as well as DNA interactions with other molecules.
The overarching aim is the development of a virtual pipeline for analysis and simulation of DNA that can help guide the synthesis of functional DNA sequences, as well as the understanding of DNA organization, interactions with other molecules, and applications in novel DNA-containing materials for nanomaterial technologies.
Team
Platform Lead:
Dr. Mariana Kozlowska
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The DNA VirtMat Unit was established by Mariana Kozlowska in 2024 in Karlsruhe.
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Mariana's interests include: multiscale simulations, biophysics, protein-DNA complexes, structuring of soft matter, materials design, and advanced programmable systems
Postdoctoral Researcher:
Dr. Abhik Ghosh Moulick
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Interests: biomolecular simulation, nucleosome dynamics, and protein-DNA interaction
Center SynGen Collaborations
The DNA VirtMat Unit collaborates extensively with Center SynGen research groups and members' groups, including those of:
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Prof. Dr. Sylvia Erhardt
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Prof. Dr. Lennart Hilbert
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Dr. Iliya Stoev
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SynDNA Lab (Dr. Konrad Herbst)
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